Research Publications

Characterizing rhizosphere microbiota of peanut (Arachis hypogaea L.) from pre-sowing to post-harvest of crop under field conditions

Authors: AnkitT. Hinsu, Ketankumar J. Panchal , Ramesh J. Pandit , PrakashG. Koringa & Ramesh K. Kothari

ISSN: 2045-2322, Journal Name: Scientific Reports, Publishing House: Nature, Year of Publication: 2021

Download DOI
Fungi with high ability to crunch multiple Polycyclic Aromatic Hydrocarbons (PAHs) from the pelagic sediments of Gulfs of Gujarat

Authors: Mayur Mahajan, Devika Manek, Nishant Vora, Ramesh K. Kothari, Chandrashekar Mootapally, Neelam M. Nathani

ISSN: 0025-326X, Journal Name: Marine Pollution Bulletin (International), Publishing House: Elsevier, Year of Publication: 2021

Download DOI
To culture or not to culture: a snapshot of culture-dependent and culture-independent bacterial diversity from peanut rhizosphere

Authors: Ankit Hinsu, Ashvin Dumadiya, Anjali Joshi, Rohitkumar Kotadiya, Kavan Andharia , Prakash Koringa and Ramesh Kothari

ISSN: 2167-8359, Journal Name: PeerJ, Publishing House: PeerJ (O'Reilly and SAGE), Year of Publication: 2021

Download DOI
Decolorization and biodegradation of textile di-azo dye Acid Blue 113 by Pseudomonas stutzeri AK6

Authors: Anjali U. Joshi, Ankit T. Hinsu, Rohitkumar J. Kotadiya, Jalpa K. Rank, Kavan N. Andharia and Ramesh K. Kothari

ISSN: 21905738, Journal Name: 3Biotech (International), Publishing House: Springer, Year of Publication: 2020

Download DOI
Evaluation of Probiotic Properties and Prebiotic Utilization Potential of Weissella paramesenteroides Isolated From Fruits

Authors: Kinjal Pabari,Sheetal Pithva, Charmy Kothari, Ravi Kiran Purama, Kanthi Kiran Kondepudi, Bharatkumar Rajiv Manuel Vyas, Ramesh Kothari and Padma Ambalam

ISSN: 1867-1306, Journal Name: Probiotics and Antimicrobial Proteins, Publishing House: Springer, Year of Publication: 2020

Download DOI
Toxicity Assessment of Biologically Degraded Product of Textile Dye Acid Red G

Authors: Priti Faldu, Vishal Kothari, Charmy Kothari, Jalpa Rank, Ankit Hinsu, and Ramesh Kothari

ISSN: 0011-748X, Journal Name: Defence Life Science Journal, Publishing House: Defence Scientific Information & Documentation Centre (DESIDOC), Year of Publication: 2019

Download DOI
Isolation, characterization, and growth response study of Chlorpyrifos utilizing soil bacterium Pseudomonas putida JR16

Authors: Jalpa K. Rank, Neelam Mathani, Ankit T. Hinsu, Anjali U. Joshi, Mootapally Chandra Shekar, Ramesh K. Kothari

ISSN: 0367-8245, Journal Name: Indian Journal of Agricultural Research, Publishing House: ARCC, Year of Publication: 2018

Download DOI
Haplotype variation and phylogenetic analyses of three commercially important morphological variants of genus Turbinella from the southeast coast of India based on the 16S rRNA gene

Authors: Sabapathi Arularasan, Neelam M Nathani, Venmathi Maran BA, Ramesh K Kothari, Chandra Shekar Mootapally

ISSN: 0250-4707, Journal Name: Bulletin of marine science, Publishing House: Rosenstiel School of Marine and Atmospheric Science, Year of Publication: 2017

Download DOI
Intriguing interaction of bacteriophage-host association: An understanding in the era of omics

Authors: Krupa M. Parmar, Saurabh L. Gaikwad, Prashant K. Dhakephalkar, Ramesh Kothari and Ravindra P. Singh

ISSN: 1664-302X, Journal Name: Frontiers in Microbiology, Publishing House: Frontiers Media S.A., Year of Publication: 2017

Download DOI
Application of next generation sequencing technologies in revealing plant-microbe interactions

Authors: Ramesh Kothari, Ravindra Pal Singh, and Vishal Kothari

ISSN: 2469-9853, Journal Name: Next Generation: Sequencing & Applications, Publishing House: IOMC, Year of Publication: 2016

Download DOI
Draft Genome Sequence of Commercial Textile Dyes Decolourizing and Degrading Bacillus subtilis strain C3 Isolated from India

Authors: Khushbu Kunadia, Neelam M. Nathani, Vishal Kothari, Rohit J. Kotadia, Charmy R. Kothari, Anjali Joshi, Jalpa K. Rank, Priti R. Faldu, M. Chandra Shekar, Mit J. Viroja, Priyank A. Patel, Divyaraj C. Jadeja, Bhaskar Reddy, Ravindra Pal Singh, Prakash G. Koringa , Chaitanya G. Joshi, Ramesh K. Kothari

ISSN: 21698287, Journal Name: Genome Announcements, Publishing House: American Society for Microbiology, Year of Publication: 2016

Download DOI
Catalyst free synthesis of thiazole derivatives bearing azo imine linkages antimicrobial Agents

Authors: Khushal Kapadiya, Kishor Kavadia, Parth Manvar, Rohit Kotadiya, Ramesh Kothari and Ranjan Khunt

ISSN: 2249 –4820, Journal Name: Chemistry & Biology Interface, Publishing House: ISCB, Year of Publication: 2015

Download DOI
Correlation between Genomic analyses with Metatranscriptomic study reveals various functional pathways of Clostridium sartagoforme AAU1, a buffalo rumen isolate

Authors: Neelam M. Nathani, Srinivas M. Duggirala, Vaibhav D. Bhatt, Amrutlal K Patel, Ramesh K. Kothari, Chaitanya G. Joshi

ISSN: 0971-2119, Journal Name: Journal of Applied Animal Research, Publishing House: Taylor and Francis, Year of Publication: 2015

Download DOI
Effect of roughage on rumen microbiota composition in the efficient feed converter and sturdy Indian Jaffrabadi buffalo (Bubalus bubalis)

Authors: Neelam M Nathani, Amrutlal K Patel, Mootapally Chandra Shekar, Bhaskar Reddy, Shailesh V Shah, Pravin M Lunagaria, Ramesh K Kothari, Chaitanya Joshi

ISSN: 1471-2164, Journal Name: BMC Genomics, Publishing House: Bentham Science, Year of Publication: 2015

Download DOI
Functional Characterization Reveals Novel Putative Coding Sequences in Prevotella ruminicola Genome Extracted from Rumen Metagenomic Studies

Authors: Neelam M. Nathani, Ramesh K. Kothari, Amrutlal K. Patel, Chaitanya G. Joshi

ISSN: 1464-1801, Journal Name: Journal of Molecular Microbiology and Biotechnology, Publishing House: S. Karger AG, Year of Publication: 2015

Download DOI
Isolation of chitinolytic Clostridium sp. NCR from Mehsana buffalo rumen, its genomic analysis and potential role in the rumen

Authors: Neelam M. Nathani, Srinivas M. Duggirala, Chandra Shekar M., Ramesh K. Kothari, Chaitanya G. Joshi

ISSN: 2213-5960, Journal Name: Genomics Data, Publishing House: Elsevier, Year of Publication: 2015

Download DOI
Synthesis and Microbial Evaluation of Versatile Base Catalyzed Chiral Tetrahydrobenzofuran Derivatives via Multicomponent Reaction

Authors: Khushal Kapadiya, Rohit Kotadiya, Kishor Kavadia, Ramesh Kothari, Krunal Mehariya and Ranjan Khunt

ISSN: 1570-1808, Journal Name: Letters in Drug Design & Discovery, Publishing House: Bentham Science, Year of Publication: 2015

Download DOI
Biodegradable gelatin–ciprofloxacin–montmorillonite composite hydrogels for controlled drug release and wound dressing application

Authors: Bhavesh D. Kevadiyaa, Shalini Rajkumar,Hari C. Bajaj, Shiva ShankaranChettiarc, KalpeshgiriGosaia, HarshadBrahmbhatta, Adarsh S. Bhatta, Yogesh K. Barvaliyad, Gaurav S. Daved, Ramesh K. Kothari

ISSN: 9277765, Journal Name: Colloids and Surfaces B: Biointerfaces, Publishing House: ScienceDirect, Year of Publication: 2014

Download DOI
Draft Genome Sequence of Petroleum Hydrocarbon Degrading Pseudomonas aeruginosa strain PK6 Isolated from Saurashtra Region of Gujarat, India

Authors: P.A.Patel, V.V.Kothari, C.R.Kothari, P.R.Faldu, K.K.Domadia, C.M.Rawal, H.D.Bhimani, N.R.Parmar, N.M.Nathani, P.G.Koringa, C.G.Joshi, R.K.Kothari

ISSN: 21698287, Journal Name: Genome Announcements, Publishing House: American Society for Microbiology, Year of Publication: 2014

Download DOI
Draft Genome Sequence of Textile Azo Dye Decolorizing and Degrading Pseudomonas aeruginosa strain PFK10 Isolated from CTETP of Ankleshwar Industrial Area of Gujarat, India

Authors: P.R.Faldu, V.V.Kothari, C.R. Kothari, C.M. Rawal, P.A.Patel, K.K.Domadia, H.D. Bhimani, V.H. Raval, N.R. Parmar, N.M. Nathani, P.G. Koringa , C.G. Joshi and R.K.Kothari

ISSN: 21698287, Journal Name: Genome Announcements, Publishing House: American Society for Microbiology, Year of Publication: 2014

Download DOI
Draft Genome Sequence of the Potential Probiotic Bacterium Lactobacillius rhamnosus Lr 231

Authors: Padma Ambalam, SheetalPithva, C.R.Kothari, R.K. Kothari, N.R.Parmar, N.M. Nathani, P.G. Koringa, C.G. Joshi, J.M. Dave, BRM Vyas

ISSN: 21698287, Journal Name: Genome Announcements, Publishing House: American Society for Microbiology, Year of Publication: 2014

Download DOI
Fuse binding protein antagonizes the transcription activity of tumor suppressor protein p53

Authors: Updesh Dixit, Zhihe Liu, Ashutosh K Pandey, Ramesh Kothari, and Virendra N Pandey

ISSN: 1471-2407, Journal Name: BMC Cancer, Publishing House: Springer, Year of Publication: 2014

Download DOI
Influence of some chemical parameters on decolorization of textile dyes by bacterial strains isolated from the wastewater treatment plant

Authors: H. D. Bhimani, D. V. Bhensdadia, C. M. Rawal, V. V. Kothari, R. K. Kothari, C. R. Kothari and G. C. Bhimani

ISSN: 1996-0808, Journal Name: African Journal of Microbiology Research, Publishing House: Academic Journals, Year of Publication: 2014

Download DOI
Isolation, Molecular Characterization, and Insight into the Genome Sequence of E. coli Bacteriophage ADB-2 from Poultry Fecal Sample

Authors: Bhensdadia DV, Bhimani HD, Nathani NM, Rawal CM, Koringa PG, Joshi CG, Kothari CR, and Kothari RK

ISSN: 2469-9853, Journal Name: Next Generation: Sequencing & Applications, Publishing House: IOMC, Year of Publication: 2014

Download DOI
Optimization of Parameters for Decolorization of a Textile azo dye, Remazol Black B (RBB) by a Newly Isolated Bacterium, Bacillus thuringiensis BYJ1

Authors: Joshi A. Y., Kothari V. V., Kothari C. R., Bhimani H. D., and Kothari R. K

ISSN: 1996-0808, Journal Name: African Journal of Microbiology Research, Publishing House: Academic Journals, Year of Publication: 2014

Download DOI
Study of rumen metagenome community 6 using qPCR under different diets

Authors: K.M. Singh, P.R. Pandya, A.K. Tripathi, G.R. Patel, S. Parnerkar, R.K. Kothari, C.G. Joshi

ISSN: 2214-5400, Journal Name: Meta Gene, Publishing House: Elsevier, Year of Publication: 2014

Download DOI
Comparative Evaluation of Rumen Metagenome Community using qPCR and MG-RAS

Authors: Neelam M. Nathani, Amrutlal K. Patel, Prakash S. Dhamanna Patil , Ramesh K. Kothari, Krishna M. Singh, and Chaitanya G. Joshi

ISSN: 2191-0855, Journal Name: AMB express, Publishing House: Springer, Year of Publication: 2013

Download DOI
Complete Genome Sequence of Escherichia Phage ADB-2 Isolated from a Fecal Sample of Poultry

Authors: D. V. Bhensdadia, H. D. Bhimani, C. M. Rawal, V. V. Kothari, V. H. Raval, C. R. Kothari, A. B. Patel, V. D. Bhatt, N. R. Parmar, M. R. Sajnani, P. G. Koringa, C. G. Joshi, S. P. Singh, and R. K. Kothari

ISSN: 21698287, Journal Name: Genome Announcements, Publishing House: American Society for Microbiology, Year of Publication: 2013

Download DOI
Genome Sequence of Salt-Tolerant Bacillus safensis Strain VK, Isolated from Saline Desert Area of Gujarat, India

Authors: V. V. Kothari, R. K. Kothari, C. R. Kothari, V. D. Bhatt, N. M. Nathani, P. G. Koringa, C. G. Joshi, B. R. M. Vyas

ISSN: 21698287, Journal Name: Genome Announcements, Publishing House: American Society for Microbiology, Year of Publication: 2013

Download DOI
Histology and Histomorphology of Hormone Treated Surati Buffalo Udder Tissue

Authors: H.H. Mehta, A.K. Patel, K.N. Nandasana, U.V. Ramani, P.G. Koringa, R.G. Shah, D.R. Barvalia, N. Kelawala, D.B. Patil, D.N. Rank, C.G. Joshi, K.M. Panchal, and Ramesh K. Kothari

ISSN: 1557-4563, Journal Name: American Journal of Animal and Veterinary Sciences, Publishing House: Science publications, Year of Publication: 2013

Download DOI
Molecular diversity of protozoa in rumen of Indian buffalo (Bubalus bubalis)

Authors: K. M. Singh, P. R. Pandya,A. K. Tripathi, G. R. Patel, S. Parnerkar, R. K. Kothari and C. G. Joshi

ISSN: 2249-720X, Journal Name: Agricultural Research, Publishing House: Springer, Year of Publication: 2013

Download DOI
Molecular Genetic Diversity and Quantitation of Methanogen in Ruminal Fluid of Buffalo (Bubalus bubalis) Fed Ration (wheat straw and concentrate mixture diet)

Authors: K.M. Singh, A. K. Tripathi, Paresh Pandya, R. K. Kothari, and C. G. Joshi

ISSN: 0016-6723, Journal Name: Genetics Research, Publishing House: Hindawi Publishing Corporation, Year of Publication: 2013

Download DOI
The Effect of Hormone Treatment on Dry Surati Buffalo Mammary Gland

Authors: H.H. Mehta, A.K. Patel, K.N. Nandasana, U.V. Ramani, P.G. Koringa, R.G. Shah, D. R. Barvalia, N.H. Kelawala, D.N. Rank, C.G.Joshi, K.M. Panchal, and R.K. Kothari

ISSN: 0975-6299, Journal Name: International Journal of Pharma and BioSciences, Publishing House: Elsevier, Year of Publication: 2013

Download DOI
Use of Real-Time PCR Technique in Determination of Major Fibrolytic and non Fibrolytic Bacteria Present in Indian Surti Buffaloes (Bubalus bubalis)

Authors: Krishna M. Singh, Ajai K. Tripathi, Paresh R. Pandya, SubhashParnerkar, Dharamsi N. Rank, Ramesh K. Kothari, and, Chaitanya G. Joshi

ISSN: 1733-1331, Journal Name: Polish Journal of Microbiology, Publishing House: Polish Society of Microbiology, Year of Publication: 2013

Download DOI
Metagenomic Analysis of Surti Buffalo (Bubalus bubalis) Rumen: A Preliminary Study

Authors: Krishna M. Singh, Viral B. Ahir, Ajai K. Tripathi, Umed V. Ramani, ManishaSajnani, Prakash G. Koringa, SubhashJakhesara, Paresh R. Pandya, Dharamsi N. Rank, Duggirala S. Murty, Ramesh K. Kothari, Chaitanya G. Joshi

ISSN: 0301-4851, Journal Name: Molecular Biology Reports, Publishing House: Springer, Year of Publication: 2012

Download DOI
Methanogen Diversity in the Rumen of Indian Surti Buffalo (Bubalus bubalis) Assessed by 16S rDNA analysis

Authors: K.M. Singh, A.K. Tripathi, P.R. Pandya, S. Parnerkar, D.N. Rank, R.K. Kothari, C.G. Joshi

ISSN: 0034-5288, Journal Name: Research in Veterinary Science, Publishing House: Elsevier, Year of Publication: 2012

Download DOI
Whole-Genome Shotgun Sequencing of the Extremophile Alkalibacillus haloalkaliphilus C-5, of Indian Origin

Authors: C. M. Rawal, V. H. Raval, H. D. Bhimani, D. V. Bhensdadia, C. R. Kothari, A. B. Patel, V. D. Bhatt, N. R. Parmar, M. R. Sajnani, P. G. Koringa, C. G. Joshi, R. K. Kothari, and S. P. Singh

ISSN: 0021-9193, Journal Name: Journal of Bacteriology, Publishing House: American Society for Microbiology, Year of Publication: 2012

Download DOI
Dasytricha Dominance in Surti Buffalo Rumen Revealed by 18S rRNA Sequences and Real-Time PCR Assay

Authors: K. M. Singh, A. K. Tripathi, P. R. Pandya, D. N. Rank, R. K. Kothari, C. G. Joshi

ISSN: 0343-8651, Journal Name: Current Microbiology, Publishing House: Springer, Year of Publication: 2011

Download DOI
Decolorization of Textile Dye Remazol Black B by Pseudomonas Aeruginosa CR-25 Isolated from the Common Effluent Treatment Plant

Authors: Jiss Joe, R. K. Kothari, C.M. Raval, C.R. Kothari, V. G. Akbari, and S. P. Singh

ISSN: 2155-6199, Journal Name: Journal of Bioremediation & Biodegradation, Publishing House: OMICS, Year of Publication: 2011

Download DOI
Molecular Identification if MethanogenicArchaea From Surti Buffaloes (BubalusBubalis), Reveals More Hydrogenotrophic Methanogens Phylotypes

Authors: Singh K.M., Pandya P.R., Parnerkar S., Tripathi A.K., Rank D.N, Kothari R.K., and Joshi C.G

ISSN: 1517-8382, Journal Name: Brazilian Journal of Microbiology, Publishing House: Springer, Year of Publication: 2011

Download DOI
Protective Effect of Lactobacillus rhamnosus 231 against N-Methyl-N'-nitro-N-nitrosoguanidine in Animal Model

Authors: Viral Gosai, Padma Ambalam, Maya Raman, C.R. Kothari, R.K. Kothari, B.R.M. Vyas, and Navin R. Sheth

ISSN: 1949-0976, Journal Name: Gut Microbes, Publishing House: Taylor and Francis, Year of Publication: 2011

Download DOI
Bacterial diversity in the rumen of Indian Surti buffalo (Bubalus bubalis), assessed by 16S rDNA analysis

Authors: P. R. Pandya, K. M. Singh, S. Parnerkar, A. K. Tripathi, H. H. Mehta, D. N. Rank, R.K. Kothari, C. G. Joshi

ISSN: 1234-1983, Journal Name: Applied Genetics, Publishing House: Springer, Year of Publication: 2010

Download DOI
Methanogenic Diversity Studies within the Rumen of Surti Buffaloes Based on Methyl Coenzyme M Reductase A (mcrA) Genes, Point to Methanobacteriales

Authors: Krishna M. Singh, Paresh R Pandya, SubhashParnerkar, Ajai K Tripathi, UmedRamani, Prakash G Koringa, Daramsi N Rank, Chaitanya G Joshi, and Ramesh K Kothari

ISSN: 1733-1331, Journal Name: Polish Journal of Microbiology, Publishing House: Polish Society of Microbiologists, Year of Publication: 2010

Download DOI